pathoscope

downloads

Species identification and strain attribution with unassembled sequencing data

Home https://github.com/PathoScope/PathoScope
Versions 2.0.6
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/pathoscope

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pathoscope

and update with:

conda update pathoscope

docker

A Docker container is available at https://quay.io/repository/biocontainers/pathoscope.