recipe pbhoover

Variant caller for legacy and low coverage Pacific Biosciences' long-read sequencing data

Homepage:

https://gitlab.com/LPCDRP/pbhoover

License:

GPLv3

Recipe:

/pbhoover/meta.yaml

package pbhoover

Versions:

1.1.0-1,  1.1.0-0,  1.0.7-5,  1.0.7-4,  1.0.7-3,  1.0.7-2,  1.0.7-0,  1.0.6-0

Depends:

• bcftools <=1.3.1

• htslib <=1.3.2

• pbcore <=1.2.7

• pbh5tools <=0.8.0

• python <3

• pyvcf <=0.6.7

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pbhoover

and update with:

conda update pbhoover

or use the docker container:

docker pull quay.io/biocontainers/pbhoover:<tag>

(see pbhoover/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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