recipe perl-bioperl-core

Perl modules for biology

Homepage:

https://metacpan.org/release/BioPerl

License:

perl_5

Recipe:

/perl-bioperl-core/meta.yaml

package perl-bioperl-core

Versions:

1.007002-3,  1.007002-2,  1.007002-1,  1.007002-0,  1.7.8-1,  1.7.8-0,  1.7.2-3,  1.6.924-2,  1.6.924-1, 

1.007002-3,  1.007002-2,  1.007002-1,  1.007002-0,  1.7.8-1,  1.7.8-0,  1.7.2-3,  1.6.924-2,  1.6.924-1,  1.6.924-0

Depends:

• perl >=5.26.2,<5.26.3.0a0

• perl-aceperl

• perl-algorithm-munkres

• perl-array-compare

• perl-bio-phylo

• perl-clone

• perl-convert-binary-c

• perl-data-stag

• perl-db-file

• perl-dbd-sqlite

• perl-dbi

• perl-error

• perl-gd

• perl-graphviz

• perl-html-tableextract

• perl-io-string

• perl-io-stringy

• perl-list-moreutils

• perl-postscript

• perl-set-scalar

• perl-soap-lite

• perl-sort-naturally

• perl-spreadsheet-parseexcel

• perl-svg

• perl-svg-graph

• perl-xml-dom

• perl-xml-dom-xpath

• perl-xml-sax-writer

• perl-xml-simple

• perl-xml-twig

• perl-xml-writer

• perl-yaml

Required By:

• brass

• perl-bio-db-refseq

• perl-bio-tools-run-remoteblast

• maker

• captus

• perl-bio-db-embl

• perl-bio-featureio

• gcluster

• perl-bio-coordinate

• stacks

• hla-la

• perl-bio-das

• perl-bio-asn1-entrezgene

• agat

• perl-bio-samtools

• perl-bioperl

• perl-bio-db-swissprot

• perl-bioperl-run

• perl-bio-searchio-hmmer

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install perl-bioperl-core

and update with:

conda update perl-bioperl-core

or use the docker container:

docker pull quay.io/biocontainers/perl-bioperl-core:<tag>

(see perl-bioperl-core/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/perl-bioperl-core/README.html)