recipe perl-fastx-reader

FASTX::Reader, Perl module to parse FASTA and FASTQ files

Homepage:

https://metacpan.org/release/FASTX-Reader

Developer docs:

https://github.com/telatin/FASTQ-Parser

License:

gpl_3

Recipe:

/perl-fastx-reader/meta.yaml

A perl module to parser FASTQ and FASTA files, gzipped or not, supporting Illumina naming scheme and paired end files

package perl-fastx-reader

Versions:

1.10.0-0,  1.9.0-0,  1.8.1-0,  1.7.0-0,  1.6.1-0,  1.6.0-0,  1.5.0-0,  1.4.1-0,  1.3.0-1, 

1.10.0-0,  1.9.0-0,  1.8.1-0,  1.7.0-0,  1.6.1-0,  1.6.0-0,  1.5.0-0,  1.4.1-0,  1.3.0-1,  1.3.0-0,  1.2.1-0,  1.1.0-0,  1.0.5-0,  1.0.4-0,  1.0.2-1,  1.0.2-0,  1.0.1-0,  1.0.0-0,  0.92-1,  0.92-0,  0.90-0,  0.88-0,  0.87-0,  0.61-0,  0.60-0

Depends:

• perl >=5.32.1,<6.0a0 *_perl5

• perl-capture-tiny

• perl-carp

Required By:

• interleafq

• dadaist2

• n50

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install perl-fastx-reader

and update with:

conda update perl-fastx-reader

or use the docker container:

docker pull quay.io/biocontainers/perl-fastx-reader:<tag>

(see perl-fastx-reader/tags for valid values for <tag>)

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