- recipe pfam_scan
pfam_scan.pl is a Perl script calling HMMER v3 to search a FASTA file against a library of Pfam HMMs.
- Homepage:
- License:
GPL (>= 2)
- Recipe:
- package pfam_scan¶
-
- Versions:
1.6-4
,1.6-3
,1.6-2
,1.6-1
,1.6-0
- Depends:
hmmer
>=3.0
perl-bioperl
>=1.4
perl-moose
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install pfam_scan
and update with:
conda update pfam_scan
or use the docker container:
docker pull quay.io/biocontainers/pfam_scan:<tag>
(see pfam_scan/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/pfam_scan/README.html)