recipe phylofisher

A package for the creation, analysis, and visualization of eukaryotic phylogenomic datasets.

Homepage:

https://github.com/TheBrownLab/PhyloFisher

License:

MIT / MIT

Recipe:

/phylofisher/meta.yaml

package phylofisher

Versions:

1.2.7-1,  1.2.7-0,  1.2.6-0,  1.2.5-0,  1.2.3-1,  1.2.3-0,  1.2.2-0,  1.2.1-0,  1.2.0-0, 

1.2.7-1,  1.2.7-0,  1.2.6-0,  1.2.5-0,  1.2.3-1,  1.2.3-0,  1.2.2-0,  1.2.1-0,  1.2.0-0,  1.1.2-0

Depends:

• astral-tree 5.7.8.*

• biopython

• blast 2.9.0.*

• cd-hit 4.8.1.*

• diamond 2.0.15.*

• dist_est 1.1.*

• ete3

• fasttree 2.1.10.*

• hmmer 3.3.*

• mafft 7.520.*

• matplotlib-base

• pandas

• pyqt

• python 3.7.10.*

• snakemake-minimal 6.1.*

• trimal 1.4.1.*

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install phylofisher

and update with:

conda update phylofisher

or use the docker container:

docker pull quay.io/biocontainers/phylofisher:<tag>

(see phylofisher/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/phylofisher/README.html)