recipe picrust2

PICRUSt: Phylogenetic Investigation of Communities by Reconstruction of Unobserved States

Homepage:

https://github.com/picrust/picrust2

License:

GNU General Public License v3.0

Recipe:

/picrust2/meta.yaml

package picrust2

Versions:

2.5.1-0,  2.5.0-0,  2.4.2-0,  2.4.1-0,  2.4.0-0,  2.3.0_b-0,  2.2.0_b-0,  2.1.4_b-0,  2.1.3_b-0, 

2.5.1-0,  2.5.0-0,  2.4.2-0,  2.4.1-0,  2.4.0-0,  2.3.0_b-0,  2.2.0_b-0,  2.1.4_b-0,  2.1.3_b-0,  2.1.2_b-0,  2.1.1_b-0,  2.1.0_b-0,  2.0.3_b-0

Depends:

• biom-format >=2.1.10

• epa-ng 0.3.8.*

• gappa 0.8.0.*

• glpk 4.65.*

• h5py >=3.1.0

• hmmer >=3.1b2,<=3.2.1

• joblib >=1.0.1

• numpy >=1.19.5

• pandas >=1.1.5

• pytest >=4.4.1

• pytest-cov >=2.6.1

• python >=3.5,<3.9

• r-base >=3.5.1

• r-castor 1.7.2.*

• scipy >=1.2.1

• sepp 4.3.10.*

• wget

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install picrust2

and update with:

conda update picrust2

or use the docker container:

docker pull quay.io/biocontainers/picrust2:<tag>

(see picrust2/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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