recipe piper

A lightweight python toolkit for gluing together restartable, robust command line pipelines

Homepage:

https://github.com/databio/pypiper/

License:

BSD / BSD-2-Clause

Recipe:

/piper/meta.yaml

package piper

Versions:

0.12.3-0,  0.12.1-1,  0.12.1-0

Depends:

• attmap >=0.12.5

• logmuse >=0.2.4

• pandas

• psutil

• python >=3

• ubiquerg >=0.4.5

• yacman

Required By:

• refgenie

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install piper

and update with:

conda update piper

or use the docker container:

docker pull quay.io/biocontainers/piper:<tag>

(see piper/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/piper/README.html)