recipe pipmir

We developed the PIPmiR algorithm to identify novel plant miRNA genes from a combination of deep sequencing data and genomic features.

Homepage

https://ohlerlab.mdc-berlin.de/software/Pipeline_for_the_Identification_of_Plant_miRNAs_84/

License

PIPmiR is provided for academic use only, if you wish to use it in another setting please contact Uwe Ohler.

Recipe

/pipmir/meta.yaml

Links

biotools: pipmir, doi: 10.1101/gr.123547.111

package pipmir

(downloads) docker_pipmir

Versions

1.1-3, 1.1-2, 1.1-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pipmir

and update with:

conda update pipmir

or use the docker container:

docker pull quay.io/biocontainers/pipmir:<tag>

(see pipmir/tags for valid values for <tag>)