We developed the PIPmiR algorithm to identify novel plant miRNA genes from a combination of deep sequencing data and genomic features.

Home https://ohlerlab.mdc-berlin.de/software/Pipeline_for_the_Identification_of_Plant_miRNAs_84/
Versions 1.1
License PIPmiR is provided for academic use only, if you wish to use it in another setting please contact Uwe Ohler.
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/pipmir
Links biotools: pipmir, doi: 10.1101/gr.123547.111


With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pipmir

and update with:

conda update pipmir


A Docker container is available at https://quay.io/repository/biocontainers/pipmir.