recipe pipmir

We developed the PIPmiR algorithm to identify novel plant miRNA genes from a combination of deep sequencing data and genomic features.

Homepage:

https://ohlerlab.mdc-berlin.de/software/Pipeline_for_the_Identification_of_Plant_miRNAs_84/

License:

PIPmiR is provided for academic use only, if you wish to use it in another setting please contact Uwe Ohler.

Recipe:

/pipmir/meta.yaml

Links:

biotools: pipmir, doi: 10.1101/gr.123547.111

package pipmir

(downloads) docker_pipmir

Versions:

1.1-5,  1.1-4,  1.1-3,  1.1-2,  1.1-1

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install pipmir

and update with:

conda update pipmir

or use the docker container:

docker pull quay.io/biocontainers/pipmir:<tag>

(see pipmir/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pipmir/README.html)