recipe plant_tribes_gene_family_classifier

Gene family classifier pipeline

Homepage

https://github.com/dePamphilis/PlantTribes

License

GNU General Public License v3 (GPLv3)

Recipe

/plant_tribes_gene_family_classifier/meta.yaml

package plant_tribes_gene_family_classifier

Versions

1.0.4-2,  1.0.4-1,  1.0.4-0,  1.0.3-2,  1.0.3-1,  1.0.3-0,  1.0.2-1,  1.0.2-0,  1.0.0-2, 

1.0.4-2,  1.0.4-1,  1.0.4-0,  1.0.3-2,  1.0.3-1,  1.0.3-0,  1.0.2-1,  1.0.2-0,  1.0.0-2,  1.0.0-1,  1.0.0-0,  0.3-1,  0.2-0,  0.1-0

Depends

• blast >=2.5.0

• hmmer >=3

• perl

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install plant_tribes_gene_family_classifier

and update with:

conda update plant_tribes_gene_family_classifier

or use the docker container:

docker pull quay.io/biocontainers/plant_tribes_gene_family_classifier:<tag>

(see plant_tribes_gene_family_classifier/tags for valid values for <tag>)

Download stats

Link to this page

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