recipe plasmidtron

PlasmidTron: assembling the cause of phenotypes from NGS data

Homepage:

https://github.com/sanger-pathogens/plasmidtron

License:

GNU General Public License v3 (GPLv3)

Recipe:

/plasmidtron/meta.yaml

package plasmidtron

Versions:

0.4.1-2,  0.4.1-1,  0.4.1-0,  0.3.5-0,  0.3.3-0

Depends:

• biopython

• kmc >=2.3.0

• matplotlib

• pyfastaq >=3.12.0

• python >=3

• spades >=3.9.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install plasmidtron

and update with:

conda update plasmidtron

or use the docker container:

docker pull quay.io/biocontainers/plasmidtron:<tag>

(see plasmidtron/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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