recipe popdel

Fast structural deletion calling on population-scale short read paired-end germline WGS data.

Homepage

https://github.com/kehrlab/PopDel

License

GPL-3.0

Recipe

/popdel/meta.yaml

package popdel

Versions

1.5.0-1,  1.5.0-0,  1.4.0-1,  1.4.0-0,  1.3.0-0,  1.2.2-0,  1.2.1-0,  1.2.0-0,  1.1.3-0, 

1.5.0-1,  1.5.0-0,  1.4.0-1,  1.4.0-0,  1.3.0-0,  1.2.2-0,  1.2.1-0,  1.2.0-0,  1.1.3-0,  1.1.2-0,  1.1.1-0,  1.1.0-0,  1.0.11-0,  1.0.8-0,  1.0.7-0,  1.0.6-0,  1.0.5-0,  1.0.4-0,  1.0.3-0,  1.0.2-0,  1.0.1-0

Depends

• htslib >=1.12,<1.13.0a0

• libgcc-ng >=9.3.0

• libstdcxx-ng >=9.3.0

• zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install popdel

and update with:

conda update popdel

or use the docker container:

docker pull quay.io/biocontainers/popdel:<tag>

(see popdel/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/popdel/README.html)