recipe pplacer

Pplacer places query sequences on a fixed reference phylogenetic tree to maximize phylogenetic likelihood or posterior probability according to a reference alignment.

Homepage

http://matsen.fredhutch.org/pplacer/

Developer docs

https://github.com/matsen/pplacer/

License

GPL / GPL-3.0

Recipe

/pplacer/meta.yaml

package pplacer

(downloads) docker_pplacer

Versions

1.1.alpha19-1, 1.1.alpha19-0, 1.1.alpha17-0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pplacer

and update with:

conda update pplacer

or use the docker container:

docker pull quay.io/biocontainers/pplacer:<tag>

(see pplacer/tags for valid values for <tag>)