pyfastaq

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Script to manipulate FASTA and FASTQ files, plus API for developers

Home https://github.com/sanger-pathogens/Fastaq
Versions 3.11.0, 3.14.0
License GNU General Public License v3 (GPLv3)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/pyfastaq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pyfastaq

and update with:

conda update pyfastaq

docker

A Docker container is available at https://quay.io/repository/biocontainers/pyfastaq.