recipe pygvcf2coverage

Python tool to extra coverage from gVCF files.

Homepage

https://github.com/varda/varda2_preprocessing

License

MIT / MIT

Recipe

/pygvcf2coverage/meta.yaml

package pygvcf2coverage

Versions

0.2-0

Depends

• cyvcf2

• python >=3.6

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install pygvcf2coverage

and update with:

conda update pygvcf2coverage

or use the docker container:

docker pull quay.io/biocontainers/pygvcf2coverage:<tag>

(see pygvcf2coverage/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/pygvcf2coverage/README.html)