recipe quasitools

Quasitools is a collection of tools for analysing Viral Quasispecies

Homepage:

https://github.com/phac-nml/quasitools/

License:

Apache License, Version 2.0

Recipe:

/quasitools/meta.yaml

package quasitools

Versions:

0.7.0-1,  0.7.0-0,  0.6.0-2,  0.6.0-1,  0.6.0-0,  0.5.1-0,  0.5.0-0,  0.4.2-0,  0.4.1-1, 

0.7.0-1,  0.7.0-0,  0.6.0-2,  0.6.0-1,  0.6.0-0,  0.5.1-0,  0.5.0-0,  0.4.2-0,  0.4.1-1,  0.4.0-1,  0.3.1-1,  0.3.1-0,  0.3.0-0,  0.2.3-0,  0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.0-0

Depends:

• biopython

• bowtie2

• click

• numpy

• pyaavf

• pysam >=0.8.1

• python

• samtools >=1.3

• scipy

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install quasitools

and update with:

conda update quasitools

or use the docker container:

docker pull quay.io/biocontainers/quasitools:<tag>

(see quasitools/tags for valid values for <tag>)

Download stats

Link to this page

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