recipe quasitools

Quasitools is a collection of tools for analysing Viral Quasispecies

Homepage

https://github.com/phac-nml/quasitools/

License

Apache License, Version 2.0

Recipe

/quasitools/meta.yaml

package quasitools

Versions

0.6.0-2, 0.6.0-1, 0.6.0-0, 0.5.1-0, 0.5.0-0, 0.4.2-0, 0.4.1-1, 0.4.0-1, 0.3.1-1, 0.3.1-0, 0.3.0-0, 0.2.3-0, 0.2.2-0, 0.2.1-0, 0.2.0-0, 0.1.0-0

Depends

• biopython

• bowtie2

• click

• numpy

• pyaavf

• pysam >=0.8.1

• python

• samtools >=1.3

• scipy

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install quasitools

and update with:

conda update quasitools

or use the docker container:

docker pull quay.io/biocontainers/quasitools:<tag>

(see quasitools/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/quasitools/README.html)