quast

downloads

Quality Assessment Tool for Genome Assemblies

Home https://sourceforge.net/projects/quast/
Versions 3.2, 4.1, 4.3, 4.4, 4.5, 4.6.1, 4.6.3
License Custom
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/quast
Links biotools: quast

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install quast

and update with:

conda update quast

Notes

- drawing MUMmer plots is disabled due to issues with gnuplot - GeneMark gene prediction software is disabled due to licensing issues

docker

A Docker container is available at https://quay.io/repository/biocontainers/quast.