recipe r-acidexperiment

Toolkit to extend the functionality of SummarizedExperiment.

Homepage

https://r.acidgenomics.com/packages/acidexperiment/

Developer docs

https://github.com/acidgenomics/r-acidexperiment

License

GPL / AGPL-3.0

Recipe

/r-acidexperiment/meta.yaml

package r-acidexperiment

Versions

0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.14-0,  0.1.13-0,  0.1.12-0,  0.1.11-0,  0.1.10-2,  0.1.10-1, 

0.2.2-0,  0.2.1-0,  0.2.0-0,  0.1.14-0,  0.1.13-0,  0.1.12-0,  0.1.11-0,  0.1.10-2,  0.1.10-1,  0.1.10-0

Depends

• bioconductor-biostrings >=2.60.0

• bioconductor-summarizedexperiment >=1.22.0

• r-acidbase >=0.4.5

• r-acidcli >=0.1.6

• r-acidgenerics >=0.5.20

• r-acidgenomes >=0.2.18

• r-acidplyr >=0.1.22

• r-base >=4.1,<4.2.0a0

• r-goalie >=0.5.4

• r-matrix >=1.3

• r-pipette >=0.7.1

• r-scales >=1.1.1

• r-sessioninfo >=1.1.1

• r-stringr >=1.4.0

• r-syntactic >=0.5.0

Required By

• r-basejump

• r-acidsinglecell

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-acidexperiment

and update with:

conda update r-acidexperiment

or use the docker container:

docker pull quay.io/biocontainers/r-acidexperiment:<tag>

(see r-acidexperiment/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-acidexperiment/README.html)