recipe r-acidgsea

Parameterized fast gene set enrichment analysis.

Homepage

https://r.acidgenomics.com/packages/acidgsea/

Developer docs

https://github.com/acidgenomics/r-acidgsea

License

GPL / AGPL-3.0

Recipe

/r-acidgsea/meta.yaml

package r-acidgsea

Versions

0.7.0-0,  0.6.4-1,  0.6.4-0

Depends

• bioconductor-biocgenerics

• bioconductor-biocparallel

• bioconductor-fgsea

• bioconductor-genomeinfodb

• bioconductor-iranges

• bioconductor-s4vectors

• bioconductor-summarizedexperiment

• r-acidbase

• r-acidcli

• r-acidexperiment

• r-acidgenerics

• r-acidgenomes

• r-acidmarkdown

• r-acidplots

• r-acidplyr

• r-base >=4.1,<4.2.0a0

• r-basejump

• r-deseqanalysis

• r-ggplot2

• r-goalie

• r-knitr

• r-pipette

• r-rmarkdown

• r-sessioninfo

• r-syntactic

Required By

• r-bcbiornaseq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-acidgsea

and update with:

conda update r-acidgsea

or use the docker container:

docker pull quay.io/biocontainers/r-acidgsea:<tag>

(see r-acidgsea/tags for valid values for <tag>)

Download stats

Link to this page

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