- recipe r-calder2
CALDER is a Hi-C analysis tool for the analysis of hierarchical chromatin interactions
- Homepage:
- License:
MIT / MIT
- Recipe:
- package r-calder2¶
-
- Versions:
0.3-1
,0.3-0
,0.2-0
,0.1-0
- Depends:
bioconductor-genomicranges
>=1.36.0
bioconductor-rhdf5
>=2.28.0
r-ape
>=5.3
r-base
>=4.2,<4.3.0a0
r-data.table
>=1.12.2
r-dendextend
>=1.12.0
r-doparallel
>=1.0.15
r-factoextra
>=1.0.5
r-fields
>=9.8.3
r-fitdistrplus
>=1.0.14
r-ggplot2
>=3.3.5
r-igraph
>=1.2.4.1
r-maptools
>=0.9.5
r-matrix
>=1.2.17
r-r.utils
>=2.9.0
r-rarpack
>=0.11.0
r-strawr
>=0.0.9
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install r-calder2
and update with:
conda update r-calder2
or use the docker container:
docker pull quay.io/biocontainers/r-calder2:<tag>
(see r-calder2/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-calder2/README.html)