recipe r-codedepends

Tools for analyzing R expressions or blocks of code and determining the dependencies between them. It focuses on R scripts, but can be used on the bodies of functions. There are many facilities including the ability to summarize or get a high-level view of code, determining dependencies between variables, code improvement suggestions.



GPL3 / GPL-3



package r-codedepends

(downloads) docker_r-codedepends



depends bioconductor-graph:

depends r-base:


depends r-codetools:

depends r-xml:



You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install r-codedepends

and update with::

   mamba update r-codedepends

To create a new environment, run:

mamba create --name myenvname r-codedepends

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull<tag>

(see `r-codedepends/tags`_ for valid values for ``<tag>``)

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