recipe r-crisprcleanr

Analysis of CRISPR functional genomics, remove false positive due to CNVs.

Homepage:

https://github.com/francescojm/CRISPRcleanR

License:

MIT / MIT

Recipe:

/r-crisprcleanr/meta.yaml

package r-crisprcleanr

Versions:

3.0.0-1,  3.0.0-0,  2.3.1-1,  2.3.1-0

Depends:

• bioconductor-biostrings

• bioconductor-dnacopy

• bioconductor-genomicalignments

• bioconductor-rqc

• bioconductor-rsubread

• bioconductor-shortread

• r-base >=4.2,<4.3.0a0

• r-biocmanager

• r-jsonlite

• r-pracma

• r-proc

• r-prroc

• r-stringr

• r-withr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-crisprcleanr

and update with:

conda update r-crisprcleanr

or use the docker container:

docker pull quay.io/biocontainers/r-crisprcleanr:<tag>

(see r-crisprcleanr/tags for valid values for <tag>)

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