recipe r-enchantr

Analysis of immune repertoires. QC and reports for the analysis of AIRR-seq data with Immcantation

Homepage:

https://bitbucket.org/kleinstein/enchantr

License:

AGPL / AGPL-3

Recipe:

/r-enchantr/meta.yaml

package r-enchantr

Versions:

0.1.2-0,  0.1.1-0,  0.1.0-2,  0.1.0-1,  0.1.0-0,  0.0.6-0,  0.0.5-0,  0.0.4-0,  0.0.3-1, 

0.1.2-0,  0.1.1-0,  0.1.0-2,  0.1.0-1,  0.1.0-0,  0.0.6-0,  0.0.5-0,  0.0.4-0,  0.0.3-1,  0.0.3-0,  0.0.1-0

Depends:

• bioconductor-complexheatmap >=2.14.0

• igphyml 1.1.5.*

• r-airr >=1.4.1

• r-alakazam >=1.2.1

• r-base >=4.2,<4.3.0a0

• r-bookdown >=0.29

• r-data.table

• r-doparallel

• r-dowser >=1.1.0

• r-dplyr

• r-dt

• r-foreach

• r-ggplot2

• r-ggraph

• r-gridextra

• r-igraph

• r-knitr

• r-optparse

• r-plotly

• r-rcolorbrewer

• r-reshape2

• r-rmarkdown

• r-scales

• r-scoper >=1.2.1

• r-shazam >1.1.0

• r-stringi

• r-stringr

• r-testthat

• r-tidyr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-enchantr

and update with:

conda update r-enchantr

or use the docker container:

docker pull quay.io/biocontainers/r-enchantr:<tag>

(see r-enchantr/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-enchantr/README.html)