Calls copy number variants (CNVs) from targeted sequence data, typically exome sequencing experiments designed to identify the genetic basis of Mendelian disorders.
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install r-exomedepth
and update with:
conda update r-exomedepth
A Docker container is available at https://quay.io/repository/biocontainers/r-exomedepth.