recipe r-genomictools.filehandler

A collection of I/O tools for handling the most commonly used genomic datafiles, like fasta/-q, bed, gff, gtf, ped/map and vcf.

Homepage

https://CRAN.R-project.org/package=GenomicTools.fileHandler

License

GPL2 / GPL-2

Recipe

/r-genomictools.filehandler/meta.yaml

package r-genomictools.filehandler

Versions

0.1.5.9-0

Depends

• bioconductor-snpstats

• r-base >=4.0,<4.1.0a0

• r-data.table >=1.9.6

Required By

• r-genomictools

• bioconductor-cetf

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-genomictools.filehandler

and update with:

conda update r-genomictools.filehandler

or use the docker container:

docker pull quay.io/biocontainers/r-genomictools.filehandler:<tag>

(see r-genomictools.filehandler/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-genomictools.filehandler/README.html)