recipe r-imputelcmd

The package contains a collection of functions for left-censored missing data imputation. Left-censoring is a special case of missing not at random (MNAR) mechanism that generates non-responses in proteomics experiments. The package also contains functions to artificially generate peptide/protein expression data (log-transformed) as random draws from a multivariate Gaussian distribution as well as a function to generate missing data (both randomly and non-randomly). For comparison reasons, the package also contains several wrapper functions for the imputation of non-responses that are missing at random. * New functionality has been added: a hybrid method that allows the imputation of missing values in a more complex scenario where the missing data are both MAR and MNAR.

Homepage

https://CRAN.R-project.org/package=imputeLCMD

License

GPL3 / GPL (>= 2)

Recipe

/r-imputelcmd/meta.yaml

package r-imputelcmd

(downloads) docker_r-imputelcmd

Versions

2.0-42.0-32.0-22.0-12.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-imputelcmd

and update with:

conda update r-imputelcmd

or use the docker container:

docker pull quay.io/biocontainers/r-imputelcmd:<tag>

(see r-imputelcmd/tags for valid values for <tag>)