-
recipe
r-leapp
¶ These functions take a gene expression value matrix, a primary covariate vector, an additional known covariates matrix. A two stage analysis is applied to counter the effects of latent variables on the rankings of hypotheses. The estimation and adjustment of latent effects are proposed by Sun, Zhang and Owen (2011). “leapp” is developed in the context of microarray experiments, but may be used as a general tool for high throughput data sets where dependence may be involved.
- Homepage
- License
GPL3 / GPL (>= 2)
- Recipe
-
package
r-leapp
¶ -
- Versions
1.2-1, 1.2-0
- Depends
r-base >=3.6,<3.7.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install r-leapp
and update with:
conda update r-leapp
or use the docker container:
docker pull quay.io/biocontainers/r-leapp:<tag>
(see r-leapp/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-leapp/README.html)