recipe r-lncpipereporter

Automatically Aggregating and Summarizing lncRNA Analysis Results for Interactive Report

Homepage

https://github.com/bioinformatist/LncPipeReporter

License

GPL-2

Recipe

/r-lncpipereporter/meta.yaml

package r-lncpipereporter

(downloads) docker_r-lncpipereporter

Versions

0.1.1-2, 0.1.1-1, 0.1.1-0

Depends bioconductor-deseq2

1.20.0.*

Depends bioconductor-edger

Depends bioconductor-noiseq

Depends libgcc-ng

>=7.3.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-cowplot

Depends r-data.table

Depends r-devtools

Depends r-dt

Depends r-flexdashboard

Depends r-ggbiplot

Depends r-ggplot2

Depends r-ggsci

Depends r-heatmaply

Depends r-htmlwidgets

Depends r-knitr

Depends r-plotly

Depends r-rmarkdown

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-lncpipereporter

and update with:

conda update r-lncpipereporter

or use the docker container:

docker pull quay.io/biocontainers/r-lncpipereporter:<tag>

(see r-lncpipereporter/tags for valid values for <tag>)