recipe r-metalonda

Identify time intervals of differentially abundant metagenomics features in longitudinal studies.

Homepage

https://github.com/aametwally/MetaLonDA

License

MIT / MIT

Recipe

/r-metalonda/meta.yaml

package r-metalonda

(downloads) docker_r-metalonda

Versions

1.1.5-0, 1.1.0-5, 1.1.0-4, 1.1.0-3, 1.1.0-2, 1.1.0-1, 1.1.0-0

Depends bioconductor-deseq2

>=1.20.0,<1.22.0

Depends bioconductor-edger

Depends bioconductor-metagenomeseq

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-catools

Depends r-doparallel

Depends r-ggplot2

Depends r-gss

Depends r-plyr

Depends r-pracma

Depends r-zoo

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-metalonda

and update with:

conda update r-metalonda

or use the docker container:

docker pull quay.io/biocontainers/r-metalonda:<tag>

(see r-metalonda/tags for valid values for <tag>)