- recipe r-monocle3
An analysis toolkit for single-cell RNA-seq.
- Homepage
- Developer docs
- License
MIT
- Recipe
- package r-monocle3¶
-
- Versions
1.0.0-2
,1.0.0-1
,1.0.0-0
,0.2.3-1
,0.2.3-0
,0.2.2-0
,0.2.1-1
,0.2.1-0
,0.2.0-1
,1.0.0-2
,1.0.0-1
,1.0.0-0
,0.2.3-1
,0.2.3-0
,0.2.2-0
,0.2.1-1
,0.2.1-0
,0.2.0-1
,0.2.0-0
,0.1.3-0
- Depends
bioconductor-biocgenerics
>=0.28
bioconductor-limma
>=3.38.3
bioconductor-summarizedexperiment
>=1.11.5
libgcc-ng
>=10.3.0
libstdcxx-ng
>=10.3.0
r-assertthat
>=0.2.1
r-base
>=4.1,<4.2.0a0
r-dplyr
>=0.8.0.1
r-ggplot2
>=3.1.1
r-ggrepel
>=0.8.1
r-htmlwidgets
>=1.3
r-igraph
>=1.2.4
r-irlba
>=2.3.3
r-lmtest
>=0.9_36
r-mass
>=7.3_51.4
r-matrix
>=1.2_17
r-pbapply
>=1.4
r-pbmcapply
>=1.4.1
r-plotly
>=4.9
r-plyr
>=1.8.4
r-proxy
>=0.4_23
r-pryr
>=0.1.4
r-pscl
>=1.5.2
r-purrr
>=0.3.2
r-rann
>=2.6.1
r-rcpp
>=1.0.1
r-reshape2
>=1.4.3
r-reticulate
>=1.11.1
r-rsample
>=0.0.5
r-rtsne
>=0.15
r-slam
>=0.1_45
r-spdep
>=1.1_2
r-speedglm
>=0.3_2
r-stringr
>=1.4
r-testthat
>=2.1
r-tibble
>=2.1.1
r-tidyr
>=0.8.3
r-uwot
>=0.1.3
r-viridis
>=0.5.1
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install r-monocle3
and update with:
conda update r-monocle3
or use the docker container:
docker pull quay.io/biocontainers/r-monocle3:<tag>
(see r-monocle3/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-monocle3/README.html)