recipe r-music

Companion package to: A bulk tissue deconvolution method with multi-subject single cell expression reference. This package provide functions to estimate bulk tissue cell type proportions with multi-subject single cell expression as reference.

Homepage

https://github.com/xuranw/MuSiC

License

GPL / GPL-3

Recipe

/r-music/meta.yaml

Links

doi: 10.1038/s41467-018-08023-x

package r-music

Versions

0.2.0-0

Depends

• bioconductor-biobase

• r-base >=4.1,<4.2.0a0

• r-ggplot2

• r-mcmcpack

• r-nnls

• r-plyr

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install r-music

and update with:

conda update r-music

or use the docker container:

docker pull quay.io/biocontainers/r-music:<tag>

(see r-music/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/r-music/README.html)