- recipe r-sartools
Statistical Analysis of RNA-Seq data
- Homepage:
- License:
GPL-2
- Recipe:
- Links:
biotools: sartools
SARTools provides R tools and an environment for the statistical analysis of RNA-Seq projects load and clean data, produce figures, perform statistical analysis/testing with DESeq2 or edgeR, export results and create final report.
- package r-sartools¶
-
- Versions:
1.8.1-1
,1.8.1-0
,1.8.0-0
,1.7.4-0
,1.7.3-3
,1.7.3-2
,1.7.3-1
,1.7.3-0
,1.7.2-0
,1.8.1-1
,1.8.1-0
,1.8.0-0
,1.7.4-0
,1.7.3-3
,1.7.3-2
,1.7.3-1
,1.7.3-0
,1.7.2-0
,1.7.1-1
,1.7.1-0
,1.6.9-0
,1.6.8-0
,1.6.6-3
,1.6.6-2
,1.6.6-1
,1.6.3-0
,1.6.0-0
,1.5.1-0
,1.4.1-0
,1.3.2-0
,1.2.0-0
- Depends:
bioconductor-deseq2
>=1.32.0
bioconductor-edger
>=3.34.0
r-ashr
>=2.2-54
r-base
>=4.2,<4.3.0a0
r-ggplot2
>=3.3.0
r-rmarkdown
>=1.4
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install r-sartools
and update with:
conda update r-sartools
or use the docker container:
docker pull quay.io/biocontainers/r-sartools:<tag>
(see r-sartools/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-sartools/README.html)