recipe r-shaman

The shaman package - sampling HiC contact matrices for a-parametric normalization

Homepage:

https://tanaylab.github.io/shaman/

License:

GPL

Recipe:

/r-shaman/meta.yaml

package r-shaman

Versions:

2.0-5,  2.0-4,  2.0-1,  2.0-0

Depends:

• bioconductor-genomeinfodb

• bioconductor-gviz

• r-base >=4.2,<4.3.0a0

• r-domc

• r-misha

• r-plyr

• r-rann

• r-reshape2

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-shaman

and update with:

conda update r-shaman

or use the docker container:

docker pull quay.io/biocontainers/r-shaman:<tag>

(see r-shaman/tags for valid values for <tag>)

Download stats

Link to this page

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