recipe r-sigqc

Provides gene signature quality control metrics in publication ready plots. Namely, enables the visualization of properties such as expression, variability, correlation, and comparison of methods of standardisation and scoring metrics.

Homepage:

https://CRAN.R-project.org/package=sigQC

License:

OTHER / file LICENSE (Restricts use)

Recipe:

/r-sigqc/meta.yaml

package r-sigqc

Versions:

0.1.22-2,  0.1.22-1,  0.1.22-0,  0.1.21-4,  0.1.21-3,  0.1.21-2,  0.1.21-1,  0.1.21-0,  0.1.14-0

Depends:

• bioconductor-complexheatmap

• bioconductor-gsva

• bioconductor-rankprod

• r-base >=4.2,<4.3.0a0

• r-biclust

• r-circlize

• r-class

• r-cluster

• r-fmsb

• r-gplots

• r-gridgraphics

• r-kernsmooth

• r-lattice

• r-mass

• r-mclust

• r-moments

• r-nnet

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-sigqc

and update with:

conda update r-sigqc

or use the docker container:

docker pull quay.io/biocontainers/r-sigqc:<tag>

(see r-sigqc/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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