recipe r-tidygenomics

Handle genomic data within data frames just as you would with 'GRanges'. This packages provides method to deal with genomic intervals the "tidy-way" which makes it simpler to integrate in the the general data munging process. The API is inspired by the popular 'bedtools' and the genome_join() method from the 'fuzzyjoin' package.

Homepage:

https://github.com/const-ae/tidygenomics

License:

GPL3 / GPL-3

Recipe:

/r-tidygenomics/meta.yaml

package r-tidygenomics

Versions:

0.1.2-5,  0.1.2-4,  0.1.2-3,  0.1.2-2,  0.1.2-1,  0.1.2-0,  0.1.0-3,  0.1.0-2,  0.1.0-0

Depends:

• bioconductor-iranges

• libgcc-ng >=12

• libstdcxx-ng >=12

• r-base >=4.2,<4.3.0a0

• r-dplyr

• r-fuzzyjoin >=0.1.3

• r-purrr

• r-rcpp

• r-rlang

• r-tidyr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install r-tidygenomics

and update with:

conda update r-tidygenomics

or use the docker container:

docker pull quay.io/biocontainers/r-tidygenomics:<tag>

(see r-tidygenomics/tags for valid values for <tag>)

Download stats

Link to this page

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