- recipe r-umianalyzer
Tools for analyzing sequencing data containing unique molecular identifiers generated by 'UMIErrorCorrect' (<https://github.com/stahlberggroup/umierrorcorrect>).
- Homepage:
- License:
GPL3 / GPL-3.0-only
- Recipe:
- package r-umianalyzer¶
-
- Versions:
1.0.0-1
,1.0.0-0
- Depends:
bioconductor-rsamtools
>=1.32.3
r-base
>=4.2,<4.3.0a0
r-dplyr
>=0.7.5
r-dt
>=0.19
r-forcats
>=0.5.0
r-ggplot2
>=2.2.1
r-gridextra
>=2.3
r-magrittr
>=1.5
r-pheatmap
>=1.0.12
r-plotly
>=4.9.2.1
r-readr
>=1.1.1
r-scales
>=1.1.0
r-shiny
>=1.7.1
r-shinydashboard
>=0.7.2
r-shinyfiles
>=0.9.0
r-shinywidgets
>=0.6.2
r-stringr
>=1.4.0
r-tibble
>=1.4.2
r-tidyr
>=0.8.1
r-viridis
>=0.5.1
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install r-umianalyzer
and update with:
conda update r-umianalyzer
or use the docker container:
docker pull quay.io/biocontainers/r-umianalyzer:<tag>
(see r-umianalyzer/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/r-umianalyzer/README.html)