recipe r2r

software to speed depiction of aesthetic consensus RNA secondary structures

Homepage:

http://breaker.research.yale.edu/R2R/

License:

GPL-2

Recipe:

/r2r/meta.yaml

package r2r

(downloads) docker_r2r

versions:
1.0.6-41.0.6-31.0.6-21.0.6-11.0.6-01.0.5-31.0.5-21.0.5-11.0.5-0

1.0.6-41.0.6-31.0.6-21.0.6-11.0.6-01.0.5-31.0.5-21.0.5-11.0.5-01.0.4-0

depends libgcc-ng:

>=12

depends libstdcxx-ng:

>=12

depends perl:

>=5.32.1,<5.33.0a0 *_perl5

depends perl-clone:

0.46.*

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install r2r

and update with::

   mamba update r2r

To create a new environment, run:

mamba create --name myenvname r2r

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/r2r:<tag>

(see `r2r/tags`_ for valid values for ``<tag>``)

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