recipe rambo-k

a reference-based tool for rapid and sensitive extraction of one organism´s reads from a mixed NGS dataset

Homepage

https://gitlab.com/SimonHTausch/RAMBO-K

License

GNU Lesser General Public License v3.0

Recipe

/rambo-k/meta.yaml

package rambo-k

(downloads) docker_rambo-k

Versions

1.21-1, 1.21-0

Depends argparse

Depends matplotlib

Depends numpy

Depends openjdk

Depends python

Depends scikit-learn

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rambo-k

and update with:

conda update rambo-k

or use the docker container:

docker pull quay.io/biocontainers/rambo-k:<tag>

(see rambo-k/tags for valid values for <tag>)