recipe rdp-readseq

Java based common sequence file format reader and sequence file manipulation.

Homepage:

https://github.com/rdpstaff/ReadSeq

License:

GPL

Recipe:

/rdp-readseq/meta.yaml

package rdp-readseq

(downloads) docker_rdp-readseq

versions:

2.0.2-12.0.2-0

depends openjdk:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install rdp-readseq

and update with::

   mamba update rdp-readseq

To create a new environment, run:

mamba create --name myenvname rdp-readseq

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/rdp-readseq:<tag>

(see `rdp-readseq/tags`_ for valid values for ``<tag>``)

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