- recipe relecov-tools
Tools for managing and processing of relecov data.
- Homepage:
- License:
GPL-3.0-or-later
- Recipe:
Tools for managing and processing of relecov network data, including download, metadata parsing, validation, and update to public databases.
- package relecov-tools¶
- versions:
1.3.0-0- depends bio:
>=1.4.0- depends bs4:
>=0.0.2- depends click:
- depends ena-upload-cli:
- depends jinja2:
>=3.0.0- depends jsonschema:
- depends openpyxl:
>=3.1.2- depends packaging:
- depends pandas:
- depends paramiko:
>=2.10.1- depends prompt_toolkit:
>=3.0.3- depends python:
>=3.7- depends pyyaml:
6.0.1- depends questionary:
- depends requests:
2.27.1- depends rich:
>=10.0.0- depends tabulate:
- depends xlsxwriter:
3.2.0- requirements:
- additional platforms:
Installation
You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install relecov-tools and update with:: mamba update relecov-tools
To create a new environment, run:
mamba create --name myenvname relecov-tools
with
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).Alternatively, use the docker container:
docker pull quay.io/biocontainers/relecov-tools:<tag> (see `relecov-tools/tags`_ for valid values for ``<tag>``)
Download stats¶
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/relecov-tools/README.html)
