recipe relocate2

a high resolution transposable element insertion sites mapping tool for population resequencing

Homepage

https://github.com/stajichlab/RelocaTE2

License

unknown

Recipe

/relocate2/meta.yaml

package relocate2

Versions

2.0.1-6,  2.0.1-5,  2.0.1-4,  2.0.1-2,  2.0.1-0,  2.0.0-1

Depends

• bedtools 2.26.0-0

• blat 35

• bowtie2 2.2.8

• bwa 0.6.2-0

• perl >=5.10.0

• pysam 0.9.0

• python 2.7.12

• samtools 1.3-0

• seqtk 1.2-0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install relocate2

and update with:

conda update relocate2

or use the docker container:

docker pull quay.io/biocontainers/relocate2:<tag>

(see relocate2/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/relocate2/README.html)