recipe rlpipes

A standardized R-loop-mapping pipeline

Homepage:

https://github.com/Bishop-Laboratory/RLPipes

License:

MIT / MIT

Recipe:

/rlpipes/meta.yaml

package rlpipes

Versions:

0.9.3-0,  0.9.1-0,  0.9.0-0

Depends:

• click

• graphviz 5.0.0

• pandas 1.2.0

• pyfastx

• pygraphviz 1.9

• pysam >=0.17.0

• pysradb

• python

• snakemake-minimal >=5.20.1,<=6.4.0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install rlpipes

and update with:

conda update rlpipes

or use the docker container:

docker pull quay.io/biocontainers/rlpipes:<tag>

(see rlpipes/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/rlpipes/README.html)