recipe rosella

Metagenomic binning pipeline and algorithm using UMAP and HDBSCAN

Homepage

https://github.com/rhysnewell/rosella.git

License

GPL3

Recipe

/rosella/meta.yaml

package rosella

Versions

0.4.1-2,  0.4.1-1,  0.4.1-0,  0.3.3-0,  0.3.2-0,  0.3.0-0,  0.2.4-0,  0.2.3-0

Depends

• bwa

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=10.3.0

• libstdcxx-ng >=10.3.0

• libzlib >=1.2.11,<1.3.0a0

• minimap2

• openssl >=1.1.1o,<1.1.2a

• parallel

• samtools

• starcode

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rosella

and update with:

conda update rosella

or use the docker container:

docker pull quay.io/biocontainers/rosella:<tag>

(see rosella/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/rosella/README.html)