recipe rosella

Metagenomic binning pipeline and algorithm using UMAP and HDBSCAN

Homepage:

https://github.com/rhysnewell/rosella.git

License:

GPL3

Recipe:

/rosella/meta.yaml

package rosella

Versions:

0.4.2-1,  0.4.2-0,  0.4.1-2,  0.4.1-1,  0.4.1-0,  0.3.3-0,  0.3.2-0,  0.3.0-0,  0.2.4-0, 

0.4.2-1,  0.4.2-0,  0.4.1-2,  0.4.1-1,  0.4.1-0,  0.3.3-0,  0.3.2-0,  0.3.0-0,  0.2.4-0,  0.2.3-0

Depends:

• bwa

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• libstdcxx-ng >=12

• libzlib >=1.2.12,<1.3.0a0

• minimap2

• openssl >=1.1.1q,<1.1.2a

• parallel

• samtools

• starcode

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install rosella

and update with:

conda update rosella

or use the docker container:

docker pull quay.io/biocontainers/rosella:<tag>

(see rosella/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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