recipe rpkmforgenes

Calculates gene expression from a read mapping file

Homepage

https://github.com/danielramskold/S3_species-specific_sequencing

License

Creative Commons Attribution License

Recipe

/rpkmforgenes/meta.yaml

package rpkmforgenes

(downloads) docker_rpkmforgenes

Versions

1.0.1-1, 1.0.1-0

Depends numpy

Depends pysam

Depends python

>=2.7,<2.8.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rpkmforgenes

and update with:

conda update rpkmforgenes

or use the docker container:

docker pull quay.io/biocontainers/rpkmforgenes:<tag>

(see rpkmforgenes/tags for valid values for <tag>)