recipe rucs

RUCS is a bioinformatics tool developed to ease the task of designing new primers.

Homepage

https://bitbucket.org/genomicepidemiology/rucs/src/master/

Documentation

https://cge.cbs.dtu.dk/services/rucs/instructions.php

License

APACHE / Apache-2.0

Recipe

/rucs/meta.yaml

Links

doi: 10.1093/bioinformatics/btx526

package rucs

Versions

1.0.2-1,  1.0.2-0

Depends

• blast

• bwa

• numpy

• primer3-py

• python >=3.5

• samtools

• tabulate

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install rucs

and update with:

conda update rucs

or use the docker container:

docker pull quay.io/biocontainers/rucs:<tag>

(see rucs/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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