salmon

downloads

Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments

Home https://github.com/COMBINE-lab/salmon
Versions 0.5.1, 0.6.0, 0.7.2, 0.8.0, 0.8.1, 0.8.2
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/salmon

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install salmon

and update with:

conda update salmon

docker

A Docker container is available at https://quay.io/repository/biocontainers/salmon.