recipe samclip

Filter SAM file for soft and hard clipped alignments

Homepage:

https://github.com/tseemann/samclip

License:

GPL-3.0

Recipe:

/samclip/meta.yaml

package samclip

Versions:

0.4.0-1,  0.4.0-0,  0.3.0-0,  0.2-2,  0.2-1,  0.2-0

Depends:

• perl

Required By:

• shovill-se

• snippy

• dragonflye

• shovill

• pathogen-profiler

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install samclip

and update with:

conda update samclip

or use the docker container:

docker pull quay.io/biocontainers/samclip:<tag>

(see samclip/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

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