samtools

downloads

Tools for dealing with SAM, BAM and CRAM files

Home https://github.com/samtools/samtools
Versions 0.1.16, 0.1.17, 0.1.18, 0.1.19, 1.0, 1.1, 1.2, 1.3, 1.3.1, 1.4, 1.4.1
License MIT
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/samtools

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install samtools

and update with:

conda update samtools

docker

A Docker container is available at https://quay.io/repository/biocontainers/samtools.