recipe sanntis

SMBGC Annotation using Neural Networks Trained on Interpro Signatures

Homepage:

https://github.com/Finn-Lab/SanntiS

License:

Apache / Apache-2.0

Recipe:

/sanntis/meta.yaml

package sanntis

Versions:

0.9.1-0,  0.1.0-0

Depends:

• biopython

• hmmer

• joblib >=1.0.1

• numpy >=1.16,<1.20

• openjdk >=11.0

• perl >=5

• prodigal

• python >=3.9

• scikit-learn 0.24.*

• tensorflow 2.4.*

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install sanntis

and update with:

conda update sanntis

or use the docker container:

docker pull quay.io/biocontainers/sanntis:<tag>

(see sanntis/tags for valid values for <tag>)

Download stats

Link to this page

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