recipe sat-bsa

Sat-BSA is a package used for applying local de novo assembly and identifying the structural variants in the assembled region

Homepage:

https://github.com/SegawaTenta/Sat-BSA

License:

GPL / GPL-3.0-or-later

Recipe:

/sat-bsa/meta.yaml

Links:

biotools: sta-bsa

package sat-bsa

Versions:

1.12-1,  1.12-0,  1.10-0

Depends:

• minimap2 2.17.*

• openjdk

• perl

• python

• r-base

• samtools 1.9.*

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install sat-bsa

and update with:

conda update sat-bsa

or use the docker container:

docker pull quay.io/biocontainers/sat-bsa:<tag>

(see sat-bsa/tags for valid values for <tag>)

Download stats

Link to this page

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